My google_scholar (H-20)



  1. Jing Lin, Christian Jordi, Minjun Son, Hoang Van Phan, Fatih Abasıyanık, Luke Vistain, Nir Drayman, Savaş Tay, “Ultra-Sensitive Digital Quantification of Proteins and mRNA in Single Cells”, Nature Communications, (2019)
  2. Fatih Abasıyanık,Hoang Van Phan, Krysta Wolfe, Jing Lin, Bhakti Patel, Bharathi Laxman, Steven R. White, Philip Verhoef, Gökhan M. Mutlu, and Savaş Tay, “Digital quantification of cytokines and bacteria predicts patient outcomes in sepsis”, Nature Communications, accepted, (2020)
  3. M Dervisevic, E Dervisevic, M Senel, E Cevik, F Abasiyanik, “Novel Amperometric Xanthine Biosensors Based on REGO-NP (Pt, Pd, and Au) Bionanocomposite Film”, Food Analytical Methods 10 (5), 1252-1263 (2017)
  4. Emre Çevik, Muamer Dervisevic, Ahmad Rabiu Gavba, K Cansu Yanik-Yildirim, Fatih Abasiyanik, Gönül Vardar-Schara, “Amperometric Monooxygenase Biosensor for the Detection of Aromatic Hydrocarbons”, Sensor Letters, Vol 14, 1-7, (2016)
  5. Cevik, O Bahar, M. Senel, F Abasiyanik, “Construction of novel electrochemical immunosensor for detection of prostate specific antigen using ferrocene-PAMAM dendrimers”, Biosensors and Bioelectronics 86, 1074-1079, (2016)
  6. Dervisevic, E. Cevik, M. Senel, C. Nergiz, F Abasiyanik “Amperometric cholesterol biosensor based on reconstituted cholesterol oxidase on boronic acid functional conducting polymers”, Journal of Electroanalytical Chemistry 776, 18-24, (2016)
  7. Shamiluulu, S., Djakbarova, U., Omorov, R., Ersan, S., & Abasiyanik, F. “Identification of critical risk factors on stomach disorders by means of a regression analysis.”, Biomedical Research, (2016)
  8. M Safdar, Y Junejo, K Arman, F Abasıyanık “A highly sensitive and specific Tetraplex PCR assay for soybean, poultry, horse and pork species identification in sausages: Development and Validation.” Meat science, (2014)
  9. M Safdar, Y Junejo, K Arman, F Abasıyanık. “Rapid Bovine and Caprine Species Identification in Ruminant Feeds by Duplex Real-Time PCR Melting Curve Analysis Using EvaGreen Fluorescence Dye.” Molecular biotechnology, 1-7, (2014)
  10. Safdar, F. Abasıyanık, “Development of fast multiplex real-time PCR assays based on EvaGreen fluorescence dye for identification of beef and soybean origins in processed sausages”, Food Research International, 54, 1652-1656, (2013)
  11. E Çevik, M Şenel, A Baykal, F Abasıyanık. “Poly (Glycidyl Methacrylate-co-vinylferrocene)-grafted Iron Oxide Nanoparticles as an Electron Transfer Mediator for Amperometric Phenol Detection.” Current Applied Physics, (2013)
  12. Safdar, M., and F. Abasıyanık. “Simultaneous Identification of Pork and Poultry Origins in Pet Foods by a Quick Multiplex Real-Time PCR Assay Using EvaGreen Fluorescence Dye.” Applied Biochemistry and Biotechnology 171.7, 1855-1864, (2013)
  13. Ergün Şakalar, Fatih Abasıyanık, “The development of duplex real-time PCR based on SYBR Green Fluorescence for rapid identification of ruminant and poultry origins in foodstuff”, Food Chemistry (ISI) , 130, 1050-1054 pp., (2012)
  14. Tugba Sagir, Salih Gencer, Nurufe Kemikli, Fatih Abasiyanik, Sevim Isik and Ramazan Ozturk, “Photodynamic activities of protoporphyrin IX and its dopamine conjugate against cancer and bacterial cell viability” (ISI), Medical Chemistry Research, DOI: 101007/S00044-011-9951-3 pp., (2012)
  15. Emre Çevik, Mehmet Şenel, Fatih Abasıyanık, “An amperometric urea biosensor based on covalent immobilization of urease on copolymer of glycidyl methacrylate and vinylferrocene”, J Solid State Electrochem (ISI), DOI: 10.1007/s10008-011-1335-6 pp., (2012)
  16. Şakalar, Ergün, Abasiyanik Fatih, “Effect of heat processing on DNA quantification of meat species.” Journal of food science 77.9, N40-N44, (2012)
  17. Emre Çevik, Mehmet Şenel, Abdulhadi Baykal, Fatih Abasıyanık, “A novel amperometric phenol biosensor based on immobilized HRP on poly (glycidylmethacrylate)-grafted iron oxide nanoparticles for the determination of phenol derivatives”, Sensors and Actuators B: Chemical, 173, 396-405, (2012)
  18. Mehmet Şenel, Emre Çevik, Fatih Abasıyanık, Ayhan Bozkurt, “Entrapment of Urease in Poly (1-vinyl imidazole)/Poly (2-acrylamido-2-methyl-1-propanesulfonic acid) Network”, Journal of Applied Polymer Science (ISI), 119, 1931-1939 pp., (2011)
  19. Ergün Şakalar, Fatih Abasıyanık, “Qualitative analysis of meat and meat products by multiplex polymerase chain reaction (PCR) technique”, African Journal of Biotechnology (ISI), 10, 46, pp., 9376-9386, (2011)
  20. İbrahim Bozgeyik, Mehmet Şenel, Ergün Çevik, Fatih Abasıyanık, “A novel thin film amperometric urea biosensor based on urease-immobilized on poly(N-glycidylpyrrole-co-pyrrole)”, Current Applied Physics (ISI), 11,4, pp., 1083-1088, (2011)
  21. Emre Çevik, Mehmet Şenel, Fatih Abasıyanık, “Immobilization of urease on copper chelated EC-Tri beads and reversible adsorption”, African Journal of Biotechnology (ISI), 10, 34, pp., 6590-6597, (2011)
  22. Mehmet Şenel, İbrahim Bozgeyik, Emre Çevik, Fatih Abasıyanık, “A novel amperometric galactose biosensor based on galactose oxidase poly(N-glycidylpyrrole-co-pyrole)”, Synthetic Metals (ISI), 160, 1, 440-444 pp., (2011)
  23. Bahar Dindar, Emine Karakuş, Fatih Abasıyanık, “New urea biosensor based on urease enzyme obtained from Helicobacter pylori”, Applied Biochemistry and Biotechnology(ISI), 165, 5, 1308-1321 pp., (2011)
  24. Mehmet Şenel, Emre Çevik, Fatih Abasıyanık, “A Novel Amperometric Hydrogen Peroxide Biosensor Based on Catalase Immobilization on Poly (glycidyl methacrylate-co-vinylferrocene)”, Analytical and Bioanalytical Electrochemistry, 3, 1, 14-25, (2011)
  25. Kerem Uzun, Emre Çevik, Mehmet Şenel, Hüseyin Sözeri, Fatih Abasıyanık, Abdülhadi Baykal, “Covalent Immobilization of Invertase on PAMAM-Dendrimer Modified Superparamagnetic Iron Oxide Nanoparticles”, Journal of Nanoparticle Research (ISI), 8, 3057-3067 pp., (2010)
  26. Şenel, F. Abasıyanık, “Construction of a Novel Glucose Biosensor Based on Covalent Immobilization of Glucose Oxidase on Poly (glycidyl methacrylate-co-vinylferrocene)”, Electroanalysis (ISI), 22, 15, 1765-1771 pp., (2010)
  27. Emre Çevik, Mehmet Şenel, Fatih Abasıyanık, “Construction of biosensor for determination of galactose with galactose oxidase immobilized on polymeric mediator contains ferrocene”, Current Applied Physics (ISI) , 10, 1313-1316 pp., (2010)
  28. F.Abasiyanik, M.Şenel, “Immobilization of glucose oxidase on reagentless ferrocene-containing polythiophene derivative and its glucose sensing application”, Journal of Electroanalytical Chemistry (ISI) , 639, 21-26 pp., (2010)
  29. Şenel, E.Çevik, F.Abasiyanik, “Amperometric hydrogen peroxide biosensor based on covalent immobilization of horseradish peroxidase on ferrocene containing polymeric mediator”, Sensors and Actuators B-Chemical (ISI), 145, 444-450 pp., (2010)
  30. Şenel, A.Coşkun, F.Abasiyanik, A.Bozkurt, “Immobilization of urease in poly(1-vinyl imidazole)/poly(acrylic acid) network”, Chemical Papers (ISI), 64, 1-7 pp., (2010)
  31. Özturk, Ş.Kalay, A.Kalkan, A.Turkan, F.Abasiyanik, Z.A.Bayir, A.Gul, “DNA and BSA binding studies of novel tetracationic phthalocyanines”, Journal of Porphyrins and Phthalocyanines (ISI), 12, 932-941 pp., (2008)
  32. Salih, F.Abasiyanik, N.Ahmed, “A preliminary study on the genetic profile of cag pathogenicity-island and other virulent gene loci of Helicobacter pylori strains from Turkey”, Infection, Genetics and Evolution (ISI), 7, 509-512 pp., (2007)
  33. Bayyurt, F.Abasiyanik, E.Sander, B.A.Salih, “Canonical correlation analysis of factors involved in the occurrence of peptic ulcers”, Digestive Diseases and Sciences (ISI), 52, 140-146 pp., (2007)
  34. A.Salih, F.Abasiyanik, N.Bayyurt, E.Sander,”H pylori infection and other risk factors associated with peptic ulcers in Turkish patients: A retrospective study”, World Journal of Gastroenterology (ISI), 13, 3245-3248 pp., (2007)
  35. Kose, F. Abasiyanik, B.A Salih, “Antibiotic resistance rates of Escherichia coli urinary tract isolates in Rize province, Turkey”, J Infect Developing Countries, 1, 2, 147-150, pp., (2007)
  36. A.Salih, F.Abasiyanik, H.Saribasak, O.Sander, “A follow-up study on the effect of Helicobacter pylori eradication on the severity of gastric histology”, Digestive Diseases and Sciences (ISI), 50, 1517-1522 pp., (2005)
  37. Petek, F.Abasiyanik, I.Uzonur, E.Okus, “Acetone soluble mutagenicity assessment tested by a salmonella/microsome system (AMES) in the strait of marmara (Black Sea and the Sea of Marmara)”, Fresenius Environmental Bulletin (ISI), 13, 1449-1452 pp., (2004)
  38. Uzonur, F.Abasiyanik, B.Bostanci, M.Eyidemir, N.Ocba, C.Yanik, M.Petek, “Re-exploring Planaria as a Model Organism for Genotoxicity Monitoring by an ‘Improved Random Amplified Polymorphic DNA’ approach”, Fresenius Environmental Bulletin (ISI), 13, 1420-1426 pp., (2004)
  39. Uzonur, F.Abasiyanik, S.Cam, K.Cobanli, A.E.Elmas, H.Erdogan, S.Hizal, D.S.Karabulut, M.Ozdemir, F.A.Yesil, M.Petek, “A preliminary report on target organ genotoxicity biomonitoring by an “improved random amplified polymorphic DNA” assay”, Fresenius Environmental Bulletin (ISI), 13, 1453-1456 pp., (2004)
  40. Şeker, F.Abasiyanik, B.A.Salih, “Rubella immune status of pregnant and non-pregnant women in Istanbul, Turkey”, Saudi Medical Journal (ISI) , 25, 575-579 pp., (2004)
  41. F.Abasiyanik, M.Tunc, B.A.Salih, “Enzyme immunoassay and immunoblotting analysis of Helicobacter pylori infection in Turkish asymptomatic subjects”, Diagnostic Microbiology and Infectious Disease (ISI), 50, 173-177 pp., (2004)
  42. A.Salih, F.Abasiyanik, “Does regular garlic intake affect the prevalence of Helicobacter pylori in asymptomatic subjects?”, Saudi Medical Journal (ISI), 24, 842-845 pp., (2003)
  43. F.Abasiyanik, E.Sander, B.A.Salih, “Helicobacter pylori anti-CagA antibodies: Prevalence in symptomatic and asymptomatic subjects in Turkey”, Canadian Journal of Gastroenterology (ISI), 16, 527-532 pp., (2002)


  1. Abasiyanik F, Lin J, Vistain L, Tay S, “A Multiplex Assay for Early Diagnosis of Sepsis”, IGSB R. Poster Session, The University of Chicago, USA, 4/72017
  2. Abasiyanik F, Kural S, Şakalar E, “Detection of milk origins in dairy products by using SYBR duplex real-time PCR (SDRT-PCR), ID1455, MIHREC 2014 Conference Proceeding, KL, Malaysia, 12/24/2014
  3. Şakalar Ergün – Fatih Abasıyanık, “The usage of bioinformatics tools for SYBR Green based multiplex identification of food DNA”, 4th International Congress On Food and Nutrition Together wth The 3rd Safe Consortium International Congress On Food Safety, Istanbul, Turkey, October/2011
  4. Sakalar E, Abasiyanik F, “The development of simultaneously DNA analysis method for rapid identification of soybean and poultry origins in foodstuff”, Proceedings of International Food Congress/Novel Approaches in Food Industry (NAFI 2011) Izmir/Turkey, 1, 123 pp, 26-29 May 2011
  5. Sakalar E, Bektik E, Abasiyanik F, “Impacts of thermal processing on the determination of DNA in beef, chicken, and pork”, Proceedings of International Food Congress/Novel Approaches in Food Industry (NAFI 2011) Izmir/Turkey, 2, 516 pp 26-29 May 2011
  6. Sakalar E, Abasiyanik F, “Quantitative specification method of soybean in meat products by DNA based molecular technique”, Proceedings of International Food Congress/Novel Approaches in Food Industry (NAFI 2011) Izmir/Turkey, 2, 517 pp 26-29 May 2011
  7. Sakalar E, Abasiyanik F, Yener B, Turmus H, “Gelatin Production”, Proceedings of International Food Congress/Novel Approaches in Food Industry (NAFI 2011) Izmir/Turkey, 2, 1068 pp, 26-29 May 2011
  8. Fatma Ebru Koc, Mehmet Senel, Fatih Abasiyanik, “The effect of Jeffamine® cored PAMAM type dendrimers on the aqueous solubility, in vitro release and anti-bacterial activity of sulfamethoxazole (SMZ) as a model drug”, Current Opinion in Biotechnology, 22, S129-S130, 2011
  9. Zeynep Aydin, Mehmet Senel, Fahri Akbas, Fatih Abasiyanik, “Jeffeamine cored PAMAM dendrimers in the efficient transfer of GFP gene into HeLa cells”, Current Opinion in Biotechnology, 22, S107, 2011
  10. Emre Çevik, Mehmet Şenel, Abdülhadi Baykal, Fatih Abasiyanik, “An amperometric biosensor based on modified nanoparticles with an electron transfer mediator for the determination of phenol derivatives”, Current Opinion in Biotechnology, 22, S64, 2011
  11. Senel M., Nergiz C., Abasiyanik M., “Reagentless Glucose Biosensor Based on Ferrocene Cored PAMAM Type Dendrimers”, 25th National Chemistry Congress with International Participations, BS-023, 123 pp., Turkey June 27 / July 2, 2011
  12. Şakalar Ergün, Fatih Abasıyanık, “Molecular food analysis: rapid identification of the species origin of meats in foodstuff by multiplex PCR”, The 1 St International Symposium On Traditional Foods From Adriatic To Caucasus, Tekirday, Turkey, April/2010
  13. Senel M., Nergiz C., Abasiyanik F., “Üreaz Enziminin Poli(Vinil Imidazol)/Poli(2-Akrilamido-2-Metil-1-Propansülfonik Asit) Sistemi İçerisine Immobilizasyonu”, 3. National Polymer Science and Technology Congress and Exhibition, Kocaeli, Turkey, PS115, 12 – 14 May 2010
  14. Şakalar Ergün, Abasiyanik F, “A molecular genetic approach to the quantitative analysis of processed meat by real-time PCR Techniques”, 3rd International Congress On Food and Nutrition – EU Quality Low-Input Food Project Final Conference, Antalya, Turkey, April/2009
  15. Abasıyanık F., Sakalar E., Senel M., “Biyosensörlere genel bir bakış ve biyosavunmada kullanılan biyosensörler”; Chemical Biological Radiological and Nuclear (KBRN’08) Congress, Istanbul, Turkey, 2008
  16. Salih BA, Abasiyanik F, Ahmed N., “Genetic profile of the cag pathogenicity-island and other virulent gene loci of Helicobacter pylori “, XXth International Workshop on Helicobacter and related bacteria in chronic digestive inflammation, Istanbul/Turkey, Helicobacter, Issue 12, pp. 4119/2007
  17. Ramazan Öztürk, Şaban Kalay, Ali Türkan, Fatih Abasıyanık, Ahmet Gül, Ayfer Kalkan, Zehra A. Bayı, “Turkish Topic: Yeni Tetrakatyonik Ftalosiyaninlerin DNA ve BSA ile Etkileşimlerinin Spektroskopik Yöntemlerle İncelenmesi”, 3. National Affinity Tech. Congress, Bursa, Turkey. January/2007
  18. Nizamettin Bayyurt, Fatih Abasiyanik, Ersan Sander, Barik A. Salih, “Canonical Correlation Analysis of Factors Involved in the Occurrence of Peptic Ulcers”, International Symposium on Health Informatics and Bioinformatics, Turkey ’07, Antalya, Turkey, May/2007
  19. Fatih Abasıyanık, Aziz Tanrıseven, Bülent Keskinler, Barık Salih, “Immobilization of Helicobacter pylori Urease”, German-Turkish Conference and Project Marketplace on Applied Research and Innovation, Branschweig, Germany, February/2007
  20. Uzonur, F. Abasiyanik, H. Ocba, H. Alindirmaz, M. Emin Kanpak, B. A. Aydin, A. Sirkeci, N. Durgun, “A new approach in detecting in-vivo & in-vitro DNA damage: DNA restoration via restorase enzyme”, 13th International Symposium on Environmental Pollution and its Impact on Life in the Mediterranean Region, Thessaloniki, Greece, September/2005
  21. İrem Uzonur, Delal Kilinc, Hansa Erimez, Serap Memik, Fatma Ozsoy, Fatih Abasiyanik, Mustafa Petek, “Hot Diet Caused DNA Damage in Buccal Mucosa as Detected by an Improved RAPD Assay”, HGM2004 Human Genome Meeting, Berlin/Germany, April/2004
  22. Salih B.A. Abasiyanik, F. Sarıbaşak H, Sander E and Hüten O., “Serological and molecular typing of Helicobacter pylori following eradication”, 2nd Molecular and Diagnostic Microbiology Congress, Antalya-Turkey, April/2002
  23. Abasiyanik, F. Tunc M., and Salih, B.A., “Helicobacter pylori CagA status in asymptomatic subjects in Turkey”, 2nd Molecular and Diagnostic Microbiology Congress, Antalya-Turkey… April/2002
  24. Abasiyanik, F. and Salih, B.A., “Antibody to CagA antigen is not a predictive of peptic ulcer disease in Turkey.”, 101st general meeting of the American Society for Microbiology (ASM), Orlando, US, June/2001
  25. Abasiyanik, F., Acar, A., Sander, E. and Salih, B.A, “Immunoblot assay for the detection of Helicobacter pylori anti-CagA and anti-Vac-A antibodies in dyspeptic patients”, 1st National Molecular and Diagnostic Microbiology Congress, Nevşehir, Turkey, April/2000
  26. Seker, S., Abasiyanik, F. and Salih, B.A, “Intrauterine infections during pregnancy and congenital syndrome: A study on the immune status of aborted women and women of childbearing age.”, 1st National Molecular and Diagnostic Microbiology Congress, Nevşehir, Turkey, April/2000
  27. Abasıyanık F, Ulaşlı M, Petek M, “Turkish Topic: Kullanılmakta Olan Bazı Pestisitlerin ve Herbisitlerin Sitotoksik ve Mutajenik Etkilerinin Araştırılması“, XIII. National Cancer Congress, Antalya, Turkey, May/1999
  28. Go to Contents


  1. Emre ÇEVİK, Ph.D., “Designing and comparison of novel smart biosensors for detection of prostate cancer”, Fatih University, 2016
  2. Shahriar SHAMILUULU, Ph.D., “Development of web-based expert system with machine learning algorithms for remote diagnosis”, Fatih University,  2016
  3. Muammer DERVISEVIC, M.Sc., “Amperometric Biosensor for detection of xanthine level for meat freshness control”, Fatih University, 2015
  4. Nurşen BALEKOGLU, M.Sc., “P19 embryonal carcinoma cell line-derived motor neurons as a model of motor neuron diseases”, Fatih University, 2015
  5. Zehra EKİNCİ, M.Sc., “Development of Evagreen real-time PCR assay for the molecular identification of potato brown rot disease causing Agent solanacearum”, Fatih University, 2014
  6. Hatice Nur AYDIN, M.Sc., “Development of a fast simple profiling method for sample screening using HRM of Y-STRs”, Fatih University 2014
  7. Sevda Yaşar ÇİMEN, M.Sc., “The effects of applied biotechnology education for teachers and pre-service teachers on their biotechnological skills”, Fatih University, 2014
  8. Lolai IKROMZODA, M.Sc., “Association of angiotensin converting enzyme I/D polymorphism with transient tachypnea of the newborn”, Fatih University,2014
  9. Merve ÇELİK, M.Sc., “The Effects of microwave irradiation on urease enzyme activity”, Fatih University, 2014
  10. Rabiu G AHMAD, M.Sc., “Microbial biosensor of phenolic compounds detection using chitosan-Fe3O4 bio- nanocomposite”, Fatih University, 2014
  11. Sibel KURAL, M.Sc., “Detection of milk origins in dairy products by SYBR duplex real-time PCR”, Fatih University, 2013
  12. Serap KEÇECİ, M.Sc., “Qualitative and quantitative detection of milk powder in UHT and pasteurized milk”, Fatih University, 2013
  13. Firdevs KOKKOKOĞLU, M.Sc., “Development of an electrochemical DNA biosensor for detection of genetic mutations”, Fatih University, 2013
  14. Muhammad SAFDAR, M.Sc., “Multiplex analysis of animal and plant species origin in feedstuffs and foodstuffs by modern pcr techniques: Qualitative-PCR & Real time PCR”, Fatih University, 2013
  15. Waris MEHMOOD, M.Sc., “The effect of molasses, urea and epiphytic fermentative mixed bacterial culture as additives on laboratory scale grass silage fermentation process and silage quality analysis”, Fatih University, 2013
  16. Muhammad Umair AHSAN, M.Sc., “Candidate gene identification in lotus Japonicus using insertional mutagenesis and genetic mapping”, Fatih University, 2013
  17. Mehmet ŞENEL, Ph.D., “Development of enzyme based amperometric glucose biosensor”, Fatih University, Coadvisor, 2012
  18. Emine KALENTZI, M.Sc., “Mitochondrial DNA analysis in anatolian populations”, Fatih University, 2012
  19. Fatma Ebru KOÇ, M.Sc., “The Investigation of JEFFAMINE cored PAMAM type dendrimers as potential drug carriers for model drugs”, Fatih University, 2012
  20. Emre ÇEVİK, M.Sc., “An amperometric biosensor based on modified nanoparticles with an electron transfer mediator for the determination of phenol derivatives”, Fatih University,2012
  21. Nurdan BÜLBÜL, M.Sc., “Antimicrobial activity screening of some ferrocene – PAMAM dendrimers”, Fatih University, 2012
  22. Ergün ŞAKALAR , M.Sc., “A molecular genetic approach to the quantitative analysis of processed meat by real-time PCR techniques and rapid identification of the species origin of meats in foodstuff by multiplex PCR”, Fatih University
  23. Kuaybe YÜCEBİLGİLİ, M.Sc., “The allele and haplotype analysis of 17 STR loci on human population of Turkey”, Fatih University, 2008
  24. Mustafa ULAŞLI, M.Sc., “Transfection of homopyrimidine third strand binding Probes “, Fatih University, 2006
  25. K. Usarov, Ph.D., ” The forecasting of H. pylori by using machine learning algorithms”, Co-advisor, UMP, Malaysia, ongoing (2019 – continue)

How to reach the hard copies of these theses: Visit the thesis center of the council of higher education ( –>enter my surname (ABASIYANIK) to the query box and select “supervisor” and run it.


  1. Salih B, Abasıyanık F, “Immunology laboratory manual “, Fatih University, 2000
  2. … Abasıyanık F, Çevik E, Şenel M, “Nanomaterials based biosensors: amperometric phenol detection”, LLAP, 978-3-659-26596-9, 2012
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